M-BISON: Microarray-Based Integration of data SOurces using Networks
The mBison_1.0-1 R package is a fully documented implementation of a robust graphical model for integrating heterogeneous biological knowledge with microarray data.
SAGAT: SVD-Augmented Gene expression Analysis Tool
The sagat 1.0-1 R package provides a computationally efficient statistical method for integrating pre-existing gene expression data with a microarray dataset.
StochOptim: Parameter Estimation for StochSS
StochSS (Stochastic Simulation Service) 1.6 provides an integrated development environment and cloud computing framework for modeling and simulation of stochastic biochemical systems.